Homework to be emailed to valenciabiologyhw@gmail.com

1.        From a diagram of an idealized flower, correctly label the following structures and describe their function

a.        sepals

b.        petals

c.        stamen: filament and anther

d.        pistil: stigma, style, ovary, carpal, ovule

2.        Distinguish between monoecious and dioecious

3.        Distinguish among generative nucleus, tube nucleus, and sperm nucleus in developing pollen grain

4.        Outline the process of double fertilization and describe the function of endosperm

5.        Describe several functions of fruit and explain how fruits form

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Angiosperm Reproduction and Biotechnology

 

 

 

 

 

 

Angiosperm Evolution

       Clarifying the origin and diversification of angiosperms

  Poses fascinating challenges to evolutionary biologists

       Angiosperms originated at least 140 million years ago

  And during the late Mesozoic, the major branches of the clade diverged from their common ancestor

Fossil Angiosperms

       Primitive fossils of 125-million-year-old angiosperms

  Display both derived and primitive traits

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Modifications in reproduction were key adaptations enabling plants to spread into a variety of terrestrial habitats.

Water has been replaced by wind and animals as a means for spreading gametes.

· Embryos are protected in seeds.

Vegetative reproduction is an asexual mechanism for propagation in many environments.  

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The angiosperm (flowering plant) life cycle includes alternation of generations during which multicellular haploid gametophyte generations alternate with diploid sporophyte generations

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The angiosperm (flowering plant) life cycle includes alternation of generations during which multicellular haploid gametophyte generations alternate with diploid sporophyte generations

 

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Gametophytes produce gametes (sperm and egg) by mitosis. The gametes fuse to form a zygote which develops into a multicellular sporophyte.

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The sporophyte is dominant in the angiosperm life cycle with the gametophyte stages being reduced and totally dependent on the sporophyte.  

An “Evo-Devo” Hypothesis of Flower Origins

       In hypothesizing how pollen-producing and ovule-producing structures were combined into a single flower

  Scientist Michael Frohlich proposed that the ancestor of angiosperms had separate pollen-producing and ovule-producing structures

Angiosperm Diversity

       The two main groups of angiosperms

  Are monocots and eudicots

       Basal angiosperms

  Are less derived and include the flowering plants belonging to the oldest lineages

       Magnoliids

  Share some traits with basal angiosperms but are more closely related to monocots and eudicots

 

 

       Exploring Angiosperm Diversity

 

Evolutionary Links Between Angiosperms and Animals

       Pollination of flowers by animals and transport of seeds by animals

  Are two important relationships in terrestrial ecosystems

Evolutionary Links Between Angiosperms and Animals

 

       : Human welfare depends greatly on seed plants

       No group is more important to human survival than seed plants

Products from Seed Plants

       Humans depend on seed plants for

  Food

  Wood

  Many medicines

 

Threats to Plant Diversity

       Destruction of habitat

  Is causing extinction of many plant species and the animal species they support

 

       Overview: To Seed or Not to Seed

       The parasitic plant Rafflesia arnoldii

  Produces enormous flowers that can produce up to 4 million seeds

 

 

 

        : Pollination enables gametes to come together within a flower

        In angiosperms, the dominant sporophyte

         Produces spores that develop within flowers into male gametophytes (pollen grains)

         Produces female gametophytes (embryo sacs)

 

        : The reproductive adaptations of angiosperms include flowers and fruits

        Angiosperms

   Are commonly known as flowering plants

   Are seed plants that produce the reproductive structures called flowers and fruits

   Are the most widespread and diverse of all plants

Characteristics of Angiosperms

       The key adaptations in the evolution of angiosperms

  Are flowers and fruits

Flowers

       The flower

  Is an angiosperm structure specialized for sexual reproduction

 

       A flower is a specialized shoot with modified leaves

  Sepals, which enclose the flower

  Petals, which are brightly colored and attract pollinators

  Stamens, which produce pollen

  Carpels, which produce ovules

 

 

Flower Structure

       Flowers

  Are the reproductive shoots of the angiosperm sporophyte

  Are composed of four floral organs: sepals, petals, stamens, and carpels

 

        Many variations in floral structure

        Have evolved during the 140 million years of angiosperm history

 

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More About Flowers

Several variations on the basic flower structure have evolved during the angiosperm evolutionary history.

Complete flower = A flower with sepals, petals, stamens and carpels.

Incomplete flower = A flower that is missing one or more of the parts listed for a complete flower (e.g. most grasses do not have petals on their flowers).

 

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Perfect flower = A flower having both stamens and carpels (may be incomplete by lacking either sepals or petals).  

Imperfect flower = A flower that is either staminate (having stamens but no carpels) or carpellate (having carpels but no stamens) - a unisex flower.

 

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Monoecious = Plants having both staminate flowers and carpellate flowers on the same individual plant.

Dioecious = Plants having staminate flowers and carpellate flowers on separate individual plants of the species.

 

Gametophyte Development and Pollination

        In angiosperms

   Pollination is the transfer of pollen from an anther to a stigma

   If pollination is successful, a pollen grain produces a structure called a pollen tube, which grows down into the ovary and discharges sperm near the embryo sac

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Mechanisms That Prevent Self-Fertilization

       Many angiosperms

  Have mechanisms that make it difficult or impossible for a flower to fertilize itself

 

        The most common anti-selfing mechanism in flowering plants

        Is known as self-incompatibility, the ability of a plant to reject its own pollen

        Researchers are unraveling the molecular mechanisms that are involved in self-incompatibility

 

       Some plants

  Reject pollen that has an S-gene matching an allele in the stigma cells

       Recognition of self pollen

  Triggers a signal transduction pathway leading to a block in growth of a pollen tube

 

       : After fertilization, ovules develop into seeds and ovaries into fruits

Double Fertilization

       After landing on a receptive stigma

  A pollen grain germinates and produces a pollen tube that extends down between the cells of the style toward the ovary

       The pollen tube

  Then discharges two sperm into the embryo sac

 

       In double fertilization

  One sperm fertilizes the egg

  The other sperm combines with the polar nuclei, giving rise to the food-storing endosperm

From Ovule to Seed

       After double fertilization

  Each ovule develops into a seed

  The ovary develops into a fruit enclosing the seed(s)

Endosperm Development

       Endosperm development

  Usually precedes embryo development

       In most monocots and some eudicots

  The endosperm stores nutrients that can be used by the seedling after germination

       In other eudicots

  The food reserves of the endosperm are completely exported to the cotyledons

Embryo Development

       The first mitotic division of the zygote is transverse

  Splitting the fertilized egg into a basal cell and a terminal cell

 

The Angiosperm Life Cycle

       In the angiosperm life cycle

  Double fertilization occurs when a pollen tube discharges two sperm into the female gametophyte within an ovule

  One sperm fertilizes the egg, while the other combines with two nuclei in the center cell of the female gametophyte and initiates development of food-storing endosperm

       The endosperm

  Nourishes the developing embryo

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

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Embryo Development (Embryogenesis)

During embryogenesis: ·     

  The zygote's first mitotic division is transverse, creating a larger basal cell and a smaller terminal cell.

    The basal cell divides transversely to form the suspensor, which anchors the embryo and transfers nutrients to it from the parent plant.

 

·   

 

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‘·       The terminal cell divides several time to form a spherical proembryo attached to the suspensor.

Cotyledons appear as bumps on the proembryo and the embryo elongates. = The apical meristem of the embryonic shoot is located between the cotyledons.

 

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Where the suspensor (the opposite end of the axis) attaches is the apex of the embryonic root with its meristem.

= The basal cell gives rise to part of the root meristem in some species.

After germination, the apical meristems at the root and shoot tips will sustain primary growth.

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= The embryo also contains protoderm, ground meristem and procambium.

·  Two features of plant form are established during embryogenesis. = The root-shoot axis with meristems at opposite ends.

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A radial pattern of protoderm, ground meristem, and procambrium ready to produce the dermal, ground, and vascular tissue systems.

 

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Structure of the Mature Seed

In mature seeds, the embryo is quiescent until germination.

·   The seed dehydrates until its water content is only 5-15% by weight.

·  The embryo is surrounded by endosperm, enlarged cotyledons, or both.

The seed coat is formed from the integuments of the ovule.  

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Below the cotyledon attachment point, the embryonic axis is termed the hypocotyl, which terminates in the radicle, or embryonic root.

Above the cotyledons, the embryonic axis is termed the epicotyl, which terminates in the plumule (shoot tip with a pair of tiny leaves).

 

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Fleshy cotyledons are present in some dicots before germination due to their absorption of nutrients from the endosperm.

In other dicots, thin cotyledons are found and nutrient absorption and transfer occurs only after germination.

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A monocot seed has a single cotyledon called the scutellum.

·    The scutellum has a large surface area and absorbs nutrients from the endosperm during germination.

The embryo is enclosed in a sheath comprised of the coleorhiza (covers the root) and the coleoptile (covers the shoot).

 

Seed Germination

       As a seed matures

  It dehydrates and enters a phase referred to as dormancy

Seed Dormancy: Adaptation for Tough Times

       Seed dormancy

  Increases the chances that germination will occur at a time and place most advantageous to the seedling

       The breaking of seed dormancy

  Often requires environmental cues, such as temperature or lighting cues

From Seed to Seedling

       Germination of seeds depends on the physical process called imbibition

  The uptake of water due to low water potential of the dry seed

 

        The radicle

        Is the first organ to emerge from the germinating seed

        In many eudicots

        A hook forms in the hypocotyl, and growth pushes the hook above ground

 

 

        Monocots

        Use a different method for breaking ground when they germinate

        The coleoptile

        Pushes upward through the soil and into the air

 

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Evolutionary adaptations in the process of germination increase the probability that seedlings will survive

Seed germination represents the continuation of growth and development which was interrupted when the embryo became quiescent at seed maturation.

 

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‘·     Some seeds germinate as soon as they reach a suitable environment.

         Other seeds require a specific environmental cue before they will break dormancy.

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Seed Dormancy

The evolution of the seed was an important adaptation by plants to living in terrestrial habitats.

·  The environmental conditions in terrestrial habitats fluctuate more often than conditions in aquatic habitats.

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Seed dormancy prevents germination when conditions for seedling growth are unfavorable.

It increases the chance that germination will occur at a time and place most advantageous to the success of the seedling.

 

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Conditions for breaking dormancy vary depending on the type of environment the plant inhabits.

· Seeds of desert plants may not germinate unless there has been heavy rainfall (not after a light shower).

· In chaparral regions where brushfires are common, seeds may not germinate unless exposed to intense heat, after a fire has cleared away older, competing vegetation.

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Other seeds may require exposure to cold, sunlight or passage through an animal's digestive system before germination will occur.

Dormant seeds may remain viable for a few days to a few decades (most are viable for at least a year or two).

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This provides a pool of ungerminated seeds in the soil which is one reason vegetation appears so rapidly after environmental disruptions.

 

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. From Seed to Seedling

The first step in seed germination in many plants is imbibition (absorption of water).

·       Hydration causes the seed to swell and rupture the seed coat.

·      Hydration also triggers metabolic changes in the embryo that cause it to resume growth.

 

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‘·      Storage materials of the endosperm or cotyledons are digested by enzymes and the nutrients transferred to the growing regions of the embryo.

For example, the embryo of a cereal grain releases a hormone (a gibberellin) as a messenger to the aleurone (outer layer of endosperm) to initiate production of

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(X­amylase and other enzymes that digest starch stored in the endosperm

          The radicle (embryonic root) then emerges from the seed.

The next step in the change from a seed to a seedling is the shoot tip breaking through the soil surface.

In many dicots, a hook forms in the hypocotyl  

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=> Growth pushes the hypocotyl above ground.

·       Light stimulates the hypocotyl to straighten, raising the cotyledons and epicotyl.

The epicotyl then spreads the first leaves which become green and begin photosynthesis.

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Germination may follow different methods depending on the plant species.

In peas, a hook forms in the epicotyl and the shoot tip is lifted by elongation of the epicotyl and straightening of the hook.

= The cotyledons remain in the ground.

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In monocots, the coleoptile pushes through the soil and the shoot tip grows up through the tunnel of the tubular coleoptile.

Only a small fraction of the seedlings will survive to the adult plant stage.

·  Large numbers of seeds and fruits are produced to compensate for this loss.

 

 

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This utilizes a large proportion of the plant's available energy.

Seed structure

 

 

Seed maturation

       Takes place in the fruit on the parent plant

       Endospermous seeds: Retain the endosperm tissue, which eventually dies but it is surrounded by a layer of living cells, the aleurone layer.

       Non-endospermous seeds: The endosperm tissue is absorbed by the cotyledons. These then become the food reserve for the seed.

Dormancy

       Metabolism falls

       Number of organelles per cell falls

       Dehydration – water content falls

       Vacuoles in cells deflate

       Food reserves become dense crystalline bodies

Maintaining dormancy

       Physical barriers
The seed coat (testa) is waxy = waterproof and impermeable to oxygen

       Physical state – dehydrated

       Chemical inhibitors present e.g. salts, mustard oils, organic acids, alkaloids

       Growth promoters absent

Seed viability

        Viability: When a seed is capable of germinating after all the necessary environmental conditions are met.

        Average life span of a seed 10 to 15 years.

        Some are very short-lived e.g. willow (< 1 week)

        Some are very long-lived e.g. mimosa 221 years

        Conditions are very important for longevity

        Cold, dry, anaerobic conditions

        These are the conditions which are maintained in seed banks

Germination: The breaking of dormancy

The growth of the embryo and its penetration of the seed coat

Germination

Stages leading to cell division

The control of food reserve hydrolysis

                 Control by growth promotors such as gibberellin and growth inhibitors such as abscisic acid

                 These directly affect the genes for enzyme synthesis or the activity of the enzymes themselves

                 The growth substances are affected by environmental factors (e.g. light, temperature, humidity)

The control of food reserve hydrolysis

        Negative feedback control of enzymes




        The action of the enzyme also limited by substrate

        Once all the starch in an amyloplast is hydrolysed the enzyme stops work

Therefore the release of the stored food is adjusted to suite the demand

 

The mobilisation of food reserves

        The food reserves are stored as large insoluble macromolecules

        They are hydrolysed using enzymes to smaller soluble molecules for transport

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The ovary develops into a fruit adapted for seed dispersal

 

A fruit develops from the ovary of the flower while seeds are developing from the ovules.

A fruit protects the seeds and aids in their dispersal by wind or animals.

 

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·       In some angiosperms, other floral parts also contribute to formation of what we call fruit:

The core of an apple is the true fruit.

The fleshy part of the apple is mainly derived from the fusion of flower parts located at the base of the flower.

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A true fruit is a ripened ovary.

·        Pollination triggers hormonal changes that cause the ovary to grow.

The wall of the ovary thickens to become the pericarp.

Transformation of a flower into a fruit parallels seed development and is called fruit set.  

Fruits

       Fruits

  Typically consist of a mature ovary

 

       Can be carried by wind, water, or animals to new locations, enhancing seed dispersal

 

 

Couroupita guianensis
Cannon Ball Tree
The amazingly complex flower of the Cannonball Tree is also heavenly scented - a cross between a fine expensive perfume and a wonderful flower scent

 

        Fruits are classified into several types

   Depending on their developmental origin

 

        Fruits are classified into several types

   Depending on their developmental origin

 

 

        Many flowering plants clone themselves by asexual reproduction

        Many angiosperm species

        Reproduce both asexually and sexually

        Sexual reproduction

        Generates the genetic variation that makes evolutionary adaptation possible

        Asexual reproduction in plants

        Is called vegetative reproduction

 

 

 

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In most plants, fruit does not develop without fertilization of ovules. (In parthenocarpic plants, fruit does develop without fertilization.)

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Depending upon their origin, fruits can be classified as:

I. Simple fruits.

         Fruit derived from a single ovary. For example, cherry (fleshy) or soybean (dry). 2. Aggregate fruits.

Fruit derived from a single flower with several separate carpels. For example, a strawberry.  

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. Multiple fruits.

Fruit derived from an inflorescence or separate tightly clustered flowers. For example, pineapple.

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Fruits ripen about the time seeds are becoming fully developed.

·       In dry fruits, such as soybean pods, the fruit tissues age and the fruit (pod) opens and releases the seeds.

         Fleshy fruits ripen through a series of steps guided by hormonal interactions.

 

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The fruit becomes softer as a result of enzymes digesting the cell wall components.

Colors usually change and the fruit becomes sweeter as organic acids or starch are converted to sugar.

These changes produce an edible fruit which entices animals to feed, thus dispersing the seeds

 

ADAPTATION FOR SEED DISPERSAL

The success of a plant not only depends on the production of seed but on the dispersal of that seed. If the seeds germinated near the parent plant they would compete.

Some Australian plants produce substances which inhibit the growth of seedlings so seeds that fall beneath the parent plant are doomed.

 

 Many mechanisms of seed dispersal are evident among Australian plants that have fruit around the seed, for example:

 Wind Dispersal

 -            winged seeds e.g. Hakea, Banksia;

                -             parachute seeds   e.g. Dandelion;

                -             feathery seeds     e.g. Clematis.

 

  

    Animal Dispersal  -  birds especially

       carried in the gut:

                -  colourful ripe fruit to attract birds;

                -  succulent fruits with hard seeds inside e.g. Geebung;

                -  sticky fruits - mistletoes.

 

 

                carried on the outside:

                -             burrs       e.g. Burr medic;

                -              hooks      e.g. Bathurst Burr;

                -              clinging hairs         e.g. many grasses

                -              spines     e.g. Bindii, Cats Head, Calthrop, Galvanised Burr.

                -glue                       e.g. Paspalum grass

 

 

 

Mechanisms of Asexual Reproduction

       Fragmentation

  Is the separation of a parent plant into parts that develop into whole plants

  Is one of the most common modes of asexual reproduction

 

       In some species

  The root system of a single parent gives rise to many adventitious shoots that become separate shoot systems

Vegetative Propagation and Agriculture

        Humans have devised various methods for asexual propagation of angiosperms

Clones from Cuttings

       Many kinds of plants

  Are asexually reproduced from plant fragments called cuttings

Grafting

       In a modification of vegetative reproduction from cuttings

  A twig or bud from one plant can be grafted onto a plant of a closely related species or a different variety of the same species

Test-Tube Cloning and Related Techniques

       Plant biologists have adopted in vitro methods

  To create and clone novel plant varieties

 

       In a process called protoplast fusion

  Researchers fuse protoplasts, plant cells with their cell walls removed, to create hybrid plants

 

        Plant biotechnology is transforming agriculture

        Plant biotechnology has two meanings

         It refers to innovations in the use of plants to make products of use to humans

         It refers to the use of genetically modified (GM) organisms in agriculture and industry

Artificial Selection

       Humans have intervened

  In the reproduction and genetic makeup of plants for thousands of years

 

       Maize

  Is a product of artificial selection by humans

  Is a staple in many developing countries, but is a poor source of protein

 

        Interspecific hybridization of plants

        Is common in nature and has been used by breeders, ancient and modern, to introduce new genes

Reducing World Hunger and Malnutrition

       Genetically modified plants

  Have the potential of increasing the quality and quantity of food worldwide

The Debate over Plant Biotechnology

       There are some biologists, particularly ecologists

  Who are concerned about the unknown risks associated with the release of GM organisms (GMOs) into the environment

Issues of Human Health

       One concern is that genetic engineering

  May transfer allergens from a gene source to a plant used for food

Possible Effects on Nontarget Organisms

       Many ecologists are concerned that the growing of GM crops

  Might have unforeseen effects on nontarget organisms

Addressing the Problem of Transgene Escape

        Perhaps the most serious concern that some scientists raise about GM crops

   Is the possibility of the introduced genes escaping from a transgenic crop into related weeds through crop-to-weed hybridization

 

       Despite all the issues associated with GM crops

  The benefits should be considered

 

Basis of regulation:

à Process of biotechnology poses no special risks.

à Foods derived from biotechnology should be regulated in the same way as traditional foods.

Therefore:

à The same laws are applicable.

à Three federal agencies have responsibility:

àUS Department of Agriculture (USDA)

àEnvironmental Protection Agency (EPA)

àFood and Drug Administration (FDA)

 

 

 

 

à Basis of regulation:
Protecting the US agriculture from agricultural pests and noxious weeds (Federal Plant Pest Act)

à Gm plants:
All plants carrying DNA from an organism considered to be a plant pest (Agrobacterium, CaMV) are defined as “regulated articles”.

à Stepwise procedure for deliberate release of gm plants:

àField trial authorisation (physical confinement),

àDetermination of non-regulated status (required for unrestricted release and movement in the US).

 

 

 

 

à A petition for nonregulated status must consider:

àharm to other organisms (beneficial & non-target org.),

àincrease in weediness,

àadverse effects on the handling, processing or storage of commodities,

àthreat to biodiversity.

à No tests requirements laid down in the Federal Plant Pest Act.

à Generally performed tests to exclude toxic effects:

àdata from field experiments on the lack of toxic effects on animals (counting),

àcomparison of the nutritional composition with a conventional counterpart.

 

 

61 gm plants are no longer regulated by USDA

(August 2003). These include:

à10x maize (HT, IR),

à10x tomatoes (PQ),

à  4x soybeans (HT),

à  4x oilseed rape (HT),

à  3x cotton (HT),

à  3x potatoes (IR, VR).

 

 

 

àBasis of regulation:
Manufacture, sale and use of pesticides; environmental safety as well as
tolerance levels for presence in foods

àGm plants:
Substances produced in a living plant to control pests (plant-incorporated protectants [PIPs]) (e.g. Bt-toxins, viral proteins)

àIn general, the data requirements for a registration of PIPs are based on those for microbial pesticides.

 

 

 

 

à These general data requirements include:

àproduct characterisation,

àmammalian toxicity (acute oral toxicity),

àeffects on non-target organisms (avian, aquatic species, beneficial insects, soil organisms),

àallergenicity potential (AA sequence homology, heat / processing stability, in vitro digestibility in gastric fluids),

àenvironmental fate, and, if appropriate,

àinsect resistance management.

à The exact data requirements for a registration are developed on a case-by-case basis.

 

 

 

8 plant-incorporated protectants (PIPs) have been

registered by EPA (June 2003):

àBt Cry IA(b) in maize (2x),

àBt Cry IA(c) in cotton,

àBt Cry IIIA in potato,

àBt Cry 1F in maize,

àBt K Cry IA(c) in maize (2x),

àPotato Leaf Roll Virus replicase in potato (Monsanto)

 

 

àBasis of regulation:
- Whole foods are under post-market authority.
- A premarket-approval is only necessary when
  substances are added to foods that are not
  “generally recognised as safe” (GRAS)
Þ Food
  additive petition. 

àGm plants:
- No pre-market approval necessary.
- All food crops on the market have undergone
  voluntary consultations.
- Responsibility (liability) rests with the companies.

àNevertheless, the FDA developed guidance documents for the industry.

 

US regulation:
 different GMOs

Trait / Organism Agency  reviewed for:    

Insect Resistance /              USDA     safe to grow

food crop               EPA         safe for the environment and
                    human consumption (PIPs)

            FDA            safe to eat (except for PIPs) and                      wholesomeness

Herbicide tolerance /           USDA     safe to grow

food crop               EPA         use of the companion herbicide

            FDA            safe to eat and wholesomeness

Modified oil content /          USDA     safe to grow

food crop               FDA        safe to eat and wholesomeness

Modified flower colour        USDA     safe to grow

ornamental crop

 

 

 

 

 

 

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The 18th century, Pharmacognosy

       Johann Adam (1759-1809)

       Linnaeus (naming and classifying plants)

       At the end of the 18th century, crude drugs were still being used as powders, simple extracts, or tinctures

 

The era of pure compounds
(In 1803, a new era in the history of medicine)

       Isolation of morphine from opium

       Strychnine (1817)

       Quinine and caffeine (1820)

       Nicotine (1828)

       Atropine (1833)

       Cocaine (1855)

 

           In the 19th century, the chemical structures of many of the isolated compounds were determined

 

           In the 20th century, the discovery of important drugs from the animal kingdom, particularly hormones and vitamins.

   microorganisms have become a very important source of drugs

 

Definitions

       Pharmacognosy:

  It is the science of biogenic or nature-derived pharmaceuticals and poisons

       Crude drugs:

   It is used for those natural products such as plants or part of plants, extracts and exudates which are not pure compounds

 

 

 

       Ethnobotany:

   It is a broad term referring to the study of plants by humans

       Ethnomedicine:

   It refers to the use of plants by humans as medicine

       Traditional medicine:

   It is the sum total of all non-mainstream medical practices, usually excluding so called “western” medicine

 

                 Natural products: they can be

 

    Entire organism (plant, animal, organism)

    Part of an organism (a leaf or flower of a plant, an isolated gland or other organ of an animal)

    An extract or an exudate of an organism

    Isolated pure compounds

 

Types of drugs derived from plants

   Herbal drugs, derived from specific parts of a medicinal plant

   Compounds isolated from nature

   Nutraceuticals, or “functional foods”

II. Value of natural products

             Compounds from natural sources play four significant roles in modern medicine:

 

  They provide a number of extremely useful drugs that are difficult, if not impossible, to produce commercially by synthetic means

  Natural sources also supply basic compounds that may be modified slightly to render them more effective or less toxic

3. Their utility as prototypes or models for synthetic drugs possessing physiologic activities similar to the originals

 

4. Some natural products contain compounds that demonstrate little or no activity themselves but which can be modified by chemical or biological methods to produce potent drugs not easily obtained by other methods

 

Baccatin III ® Taxol

III. Production of natural drug products

    Collection (wild)

    Cultivation (commercial), collection, harvesting, drying, garbling, packaging, storage and preservation  e.g. ginseng, ginkgo, peppermint

    Fermentation                           (Recombinant DNA technology or Genetically engineered drugs)                                                                

    Cell-culture techniques

    Microbial transformation

    Biologics (prepared from the blood of animals)

IV. The role of natural products in drug discovery

   Combinatorial chemistry

   High-throughput screening of natural products

   Combinatorial biosynthesis

   Ethnopharmacology

V. General principles of botany: morphology and systematics

             How to define a pharmaceutical plant-derived drug from the botanical point of view ?

 

                a botanical drug is a product that is either:

                Derived from a plant and transformed into a drug by drying certain plant parts, or sometimes the whole plant, or

   Obtained from a plant, but no longer retains the structure of the plant or its organs and contains a complex mixture of biogenic compounds (e.g. fatty and essential oils, gums, resins, balms)

     isolated pure natural products are thus not “botanical drugs”, but rather chemically defined drugs derived from nature.

u the following plant organs are the most important, with the Latin name that is used, for example in international trade, in parentheses:

Aerial parts or herb (herba)

Leaf (folia)

Flower (flos)

Fruit (fructus)

Bark (cortex)

Root (radix)

Rhizome (rhizoma)

Bulb (bulbus)

 

       The large majority of botanical drugs in current use are derived from leaves or aerial parts.

 

       A plant-derived drug should be defined not only in terms of the species from which it is obtained but also the plant part that is used to produce the dried product. Thus, a drug is considered to be adulterated if the wrong plant parts are included (e.g. aerial parts instead of leaves)

Taxonomy

           It is the science of naming organisms and their correct integration into the existing system of nomenclature

 

           The names of species are given in binomial form: the first part of the name indicates the wider taxonomic group, the genus; the second part of the name is the species.

Papaver somniferum L.

           Species: somniferum, here meaning ‘sleep-                                          producing’

           Genus: Papaver (a group of species, in                                             this case poppies, which are                                                   closely related)

           Family: Papaveraceae (a group of genera                             sharing certain traits)

           L.: indicates the botanist who provided the     first scientific description of the species       and who assigned the botanical name

Morphology of higher plants

1. Flower

 

                  It is the essential reproductive organ of a plant.

                  For an inexperienced observer, two characteristics of a flower are particularly noteworthy: the size and the color

                  Although the flowers are of great botanical importance, they are only a minor source of drugs used in phytotherapy or pharmacy e.g. chamomile, Matricaria recutita L. (Asteraceae ) 

 

2. Fruit and seed

        The lower plants, such as algae, mosses and ferns, do not produce seeds

 

Gymnosperm and Angiosperm

 

        Gymnosperm: they are characterized by seeds that are not covered by a secondary outer protective layer, but only by the testa – the seed’s outer layer

         Angiosperm: the seeds are covered with a specialized organ (the carpels) which in turn develop into the pericarp.

 

           Drugs from the fruit thus have to be derived from an angiosperm species

 

           Fruits and seeds have yielded important phytotherapeutic products, including:

Ø  Fruit

  Caraway, Carum carvi L. (Umbelliferae)

Ø  Seed

   (white) mustard, Sinapis alba L. (Brassicaceae)

 

 3. Leaves

            The function of the leaves, as collectors of the sun’s energy and its assimilation, results in their typical general anatomy with a petiole (stem) and a lamina (blade)

            A key characteristic of a species is the way in which the leaves are arranged on the stem, they may be:

  Alternate

  Distichous

  Opposite

  Decussate

  Whorled

 

 

       The form and size of leaves are   essential characteristics e.g. oval, oblong, obovate, rounded, linear, lanceolate, elliptic, spatulate, cordate, hastate or tendril

 

       The margin of the leaf is another characteristic feature e.g. entire, serrate, dentate, sinuate, ciliate or spinose

 

 

       Numerous drugs contain leaf material as the main component. e.g.

           

  Deadly nightshade, Atropa belladonna L.                                                                                           (Solanaceae)

 

4. Bark

 

       The bark as an outer protective layer frequently accumulates biologically active substances e.g.

            Red cinchona, Cinchona succirubra L.

                             (Rubiaceae)

       No stem-derived drug is currently of major importance

 

5. Rhizome and root drugs

                 Underground organs of only a few species have yielded pharmaceutically important drugs e.g.

   Sarsaparilla, Smilax regelii                                                                                              (Smilacaceae)

   Korean ginseng, Panax ginseng                                                                (Araliaceae)

6. The bulbs and exudates

   Garlic, Allium sativum L. (Liliaceae)

   Aloe vera L. (Asphodelaceae)

 

Medicinal Chemistry

Urgent need to study medicinal plants

                To rescue knowledge in imminent danger of being lost

Inventory by WHO found 20,000 plant species in use for medicine in 90 countries

Only 250 of those species are commonly used or have been checked for main active chemical compounds

Urgent need to study medicinal plants

                The utility of plants in current therapy

There has been a rush to develop synthetic medicines based on plant medicines, but often the synthetic medicines don’t work as well as the original plant medicines.

For example – quinine and malaria

Efficacy of Quinine

        Quinine is traditional and effective preventative of malaria

        Synthetic preventatives such as chloroquine, maloprim, and fansidar have largely replaced the use of quinine

        Many strains of Plasmodium have developed resistances to the synthetics and the synthetics are more toxic.  It is recommended that people do not take fansidar for more than 3 months due to potential liver damage.

Malaria Cycle

Anopheles freeborni mosquito   intermediate host and vector for Plasmodium sp.

Historical distribution of Malaria

Red areas show countries with malaria today

One of the sources of  QuinineCinchona succirubra

Cinchona pubescens

Timeline of Quinine Use

         1633, a Jesuit priest named Father Calancha described how to use quinine bark to cure fevers

         1645 Father Bartolome Tafur took some bark to Rome and many of the clergy used it

         Cardinal John de Lugo wrote a pamphlet to be distributed with the bark - use of the bark became so widespread that in the papal conclave of 1655 no one died of malaria

         1654 – English aware of use of quinine bark

         1735, a French botanist named Joseph de Jussieu journeyed to South America and found and described the tree that is the source of the bark - he sent samples to Sweden where in 1739, Carl Linneaus named the tree genus Cinchona

 

Timeline of Quinine Use

        20 to 40 species of Cinchona - the species are very hard to tell apart and the species will hybridize, so the exact number of species is unknown – mostly understorey trees

        1820 the French chemists Joseph Pelletier and Joseph Caventou isolated the alkaloid quinine from the bark and identified it was the active ingredient in Peruvian bark

        1861, an Australian named Charles Ledger obtained seeds from an Aymara Indian named Manuel Incra

        by 1930, the Dutch orchards in Java produced 22 million pounds of quinine, 97% of the world’s market

Chemical structure of quinine

Properties of Quinine

        Quinine itself is an odorless white powder with an extremely bitter taste

        It can be used to treat cardiac arrhythmias as well as malaria - it is also used as a flavoring agent

        Quinine prevents malaria by suppressing reproduction of the Plasmodium and also helps prevent some of the fevers and pain associated with malaria

Quinine fluoresces under UV light

Raymond Fosberg in the
field in 1948

Cinchona bark drying in the sun in Ecuador, 1944

Urgent need to study medicinal plants

3.  To find new molecular models in plants

Many times we can take a plant chemical and modify it or make synthetic copies of it that are very valuable to us.

Lippia dulcis – sweetener from
Pre-Columbian America

Lippia as a sweetener

       In Pre-Columbian America, several plants of the genus Lippia were used as sweeteners.  (F. Verbenaceae – the verbenas).

       In the 20th century, L. dulcis was chemically analyzed and a new sweetener was found, hernandulcin, that is 800 to 1000 times sweeter than sucrose.

Urgent need to study medicinal plants

4.  The wide use of plants in folk medicine

One positive aspect of the use of medicinal plants is their low cost compared to the high price of new synthetic drugs that are totally inaccessible to the vast majority of the world’s people.  Another benefit is that most medicinal plants don’t have the kinds of harmful side effects seen with synthetic drugs.

Plants and Human Cosmologies

Cosmologies

Cosmologies are branches of philosophy which deal with the origins and structures of the universe - religions that explain how the universe formed and our place within it are one kind (a very powerful kind) of cosmology

The Oak of Guernica

Basque coat of arms with
Oak of Guernica

Oak of Guernica by Wordsworth - 1810

          THE OAK OF GUERNICA

The ancient oak of Guernica, says Laborde in his account of Biscay, is a most venerable natural monument. Ferdinand and Isabella, in the year 1476, after hearing mass in the church of Santa Maria de la Antigua, repaired to this tree, under which they swore to the Biscayans to maintain their "fueros" (privileges). What other interest belongs to it in the minds of this people will appear from the following.

SUPPOSED ADDRESS TO THE SAME

OAK of Guernica! Tree of holier power
Than that which in Dodona did enshrine
(So faith too fondly deemed) a voice divine
Heard from the depths of its aerial bower--
How canst thou flourish at this blighting hour?
What hope, what joy can sunshine bring to thee,
Or the soft breezes from the Atlantic sea,
The dews of morn, or April's tender shower?
Stroke merciful and welcome would that be
Which should extend thy branches on the ground,
If never more within their shady round
Those lofty-minded Lawgivers shall meet,
Peasant and lord, in their appointed seat,
Guardians of Biscay's ancient liberty.

Guernica by Picasso

Moses and The Burning Bush

The sacred Maori Waka Huia

The sacred Maori Waka Huia

Miro tree – Podocarpus ferruginea